The group is funded by and located at the University Hospital Essen.
Still, it maintains a close collaboration with the Faculty of Computer Science at TU Dortmund.
Still, it maintains a close collaboration with the Faculty of Computer Science at TU Dortmund.
Current Third-Party Funded Projects
1. Ressourcen-beschränkte Analyse von Spektrometriedaten
Teilprojekt TB1 im DFG Sonderforschungsbereich SFB 876: "Verfügbarkeit von Information durch Analyse unter Ressourcenbeschränkung", 01.01.2011 bis 31.12.2014: Transferprojekt in Zusammenarbeit mit der Firma B&S-Analytik in Dortmund.2. Exom-Analysen bei Patienten mit distinkten Entitäten mit dem Leitsymptom "Mikrotie"
Gemeinsames Projekt mit der Humangenetik am Universitätsklinikum Essen, gefördert durch das Mercator Research Center Ruhr (MERCUR), Dezember 2010 bis November 2011.Collaborations
Below, we list some of our local, national and international collaborations.
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Human Genetics, UK Essen, Germany Dr. Zeschnigk,Prof. Horsthemke |
Next generation bisulfite sequencing (especially of CpG islands); Analysis of methylation. |
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Human Genetics, UK Essen, Germany Dr. Zeschnigk, Prof. Wieczorek, Prof. Lohmann, Prof. Horsthemke |
Exome Sequencing, Analysis of SNPs in rare diseases (project funded by MERCUR). |
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Pediatric Oncology, UK Essen, Germany Dr. Schramm, Dr. Schulte, Prof. Eggert |
Analysis of neuroblastoma tumors via next-generation sequencing, in particular: transcriptome, non-coding RNAs. |
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B&S Analyik GmbH, Dortmund, Germany PD Dr. Baumbach |
Resource-constrained analysis of spectrometry data, in particular ion mobility spectra (project TB1 of SFB 876). |
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Algorithmic Bioinformatics, FU Berlin Prof. Knut Reinert |
SeqAn - C++ software library for biological sequence analysis |
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Computational Biology Research Illumina Cambridge UK Dr. Dirk Evers |
Exchange of experience analyzing illumina high-throughput sequencing data; beta software access |
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Computational Molecular Biology Max Planck Institute for Molecular Genetics (Berlin) Dr. Stefan Haas, Prof. Martin Vingron |
Analysis of massive next generation sequence datasets |
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Institute for Genome Research and Systems Biology CeBiTec, Bielefeld University Dr. Andreas Tauch, Prof. Alfred Pühler |
Development of integrative analysis tool for systems biology of prokaryotes (e.g., CoryneRegNet) |