Current Third-Party Funded Projects

1. Ressourcen-beschränkte Analyse von Spektrometriedaten

Teilprojekt TB1 im DFG Sonderforschungsbereich SFB 876: "Verfügbarkeit von Information durch Analyse unter Ressourcenbeschränkung", 01.01.2011 bis 31.12.2014: Transferprojekt in Zusammenarbeit mit der Firma B&S-Analytik in Dortmund.

2. Exom-Analysen bei Patienten mit distinkten Entitäten mit dem Leitsymptom "Mikrotie"

Gemeinsames Projekt mit der Humangenetik am Universitätsklinikum Essen, gefördert durch das Mercator Research Center Ruhr (MERCUR), Dezember 2010 bis November 2011.

---

Collaborations

Below, we list some of our local, national and international collaborations.

	Human Genetics, UK Essen, Germany Dr. Zeschnigk,Prof. Horsthemke	Next generation bisulfite sequencing (especially of CpG islands); Analysis of methylation.
	Human Genetics, UK Essen, Germany Dr. Zeschnigk, Prof. Wieczorek, Prof. Lohmann, Prof. Horsthemke	Exome Sequencing, Analysis of SNPs in rare diseases (project funded by MERCUR).
	Pediatric Oncology, UK Essen, Germany Dr. Schramm, Dr. Schulte, Prof. Eggert	Analysis of neuroblastoma tumors via next-generation sequencing, in particular: transcriptome, non-coding RNAs.
	B&S Analyik GmbH, Dortmund, Germany PD Dr. Baumbach	Resource-constrained analysis of spectrometry data, in particular ion mobility spectra (project TB1 of SFB 876).
	Algorithmic Bioinformatics, FU Berlin  Prof. Knut Reinert	SeqAn - C++ software library for biological sequence analysis
	Computational Biology Research  Illumina Cambridge UK  Dr. Dirk Evers	Exchange of experience analyzing illumina high-throughput sequencing data; beta software access
	Computational Molecular Biology  Max Planck Institute for Molecular Genetics (Berlin)  Dr. Stefan Haas, Prof. Martin Vingron	Analysis of massive next generation sequence datasets
	Institute for Genome Research and Systems Biology  CeBiTec, Bielefeld University  Dr. Andreas Tauch, Prof. Alfred Pühler	Development of integrative analysis tool for systems biology of prokaryotes (e.g., CoryneRegNet)